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ABySS is currently available on the high memory nodes

ABySS: is a de novo, parallel, paired-end sequence assembler that is designed for short reads. The single-processor version is useful for assembling genomes up to 100 Mbases in size. The parallel version is implemented using MPI and is capable of assembling larger genomes.

To load Abyss type the following:

$ module load bigmem gcc abyss


support/hpc/software/abyss.txt · Last modified: 2012/02/22 13:17 by tlknight