User Tools

Site Tools


support:hpc:software:dssp

DSSP

The DSSP program was designed by Wolfgang Kabsch and Chris Sander to standardize secondary structure assignment. DSSP is a database of secondary structure assignments for all protein entries in the Protein Data Bank (PDB). DSSP is also the program that calculates DSSP entries from PDB entries.

The DSSP database is located on farm.caes.ucdavis.edu in /share/apps/databases/dssp

The output of DSSP is explained extensively here.

support/hpc/software/dssp.txt · Last modified: 2012/06/12 17:49 by tlknight